STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY68301.1Lysophospholipase L1. (212 aa)    
Predicted Functional Partners:
SDZ14316.1
Acetyl esterase/lipase.
 
     0.934
SDZ29785.1
Sialate O-acetylesterase.
 
     0.918
SDY49050.1
Sialate O-acetylesterase.
 
     0.912
SDZ20889.1
alpha-L-fucosidase 2.
 
 
   0.662
SDY43381.1
3-hydroxyacyl-CoA dehydrogenase.
     
 0.587
SDZ16989.1
Cellobiose phosphorylase.
     
 0.552
SDZ28761.1
Pectinesterase.
    
 0.532
SDZ14250.1
Glycosyl hydrolases family 2, sugar binding domain.
 
  0.500
SDZ53599.1
Hypothetical protein.
  
     0.489
SDY69047.1
Por secretion system C-terminal sorting domain-containing protein.
  
  0.483
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.