STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY73146.1Na+-transporting NADH:ubiquinone oxidoreductase subunit B. (404 aa)    
Predicted Functional Partners:
SDY73116.1
Na+-transporting NADH:ubiquinone oxidoreductase subunit A.
 0.999
SDY73172.1
Na+-transporting NADH:ubiquinone oxidoreductase subunit C.
 
 0.999
SDY73197.1
Na+-transporting NADH:ubiquinone oxidoreductase subunit D.
 
 0.999
SDY73219.1
Na+-transporting NADH:ubiquinone oxidoreductase subunit E.
 
 0.999
SDY51665.1
Na+-transporting NADH:ubiquinone oxidoreductase subunit F.
 
 0.986
SDY66907.1
Thiamine biosynthesis lipoprotein.
 
   
 0.821
SDZ58597.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
     
 0.576
SDY73052.1
Cytidylate kinase.
  
    0.497
SDY73085.1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
  
    0.496
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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