STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY64367.1Type III pantothenate kinase. (257 aa)    
Predicted Functional Partners:
SDY45181.1
Pantothenate synthetase.
  
 
 0.933
SDZ56375.1
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase.
 
 
 0.906
SDY39941.1
Type III pantothenate kinase.
  
  
 
0.895
SDY88029.1
Phosphopantetheine adenylyltransferase.
 
  
 0.890
SDY45144.1
L-aspartate 1-decarboxylase.
 
 
 0.833
SDY73052.1
Cytidylate kinase.
 
  
 0.616
SDY64397.1
L-amino acid N-acyltransferase YncA.
       0.541
SDY40689.1
XTP/dITP diphosphohydrolase.
   
 
  0.420
SDZ00319.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
 
    0.406
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.