Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY99501.1 | SDY99525.1 | SAMN05444412_104227 | SAMN05444412_104228 | Hypothetical protein. | ABC transporter. | 0.623 |
SDY99501.1 | SDY99548.1 | SAMN05444412_104227 | SAMN05444412_104229 | Hypothetical protein. | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase. | 0.623 |
SDY99501.1 | SDY99566.1 | SAMN05444412_104227 | SAMN05444412_104230 | Hypothetical protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.623 |
SDY99501.1 | SDY99589.1 | SAMN05444412_104227 | SAMN05444412_104231 | Hypothetical protein. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase. | 0.527 |
SDY99501.1 | SDY99616.1 | SAMN05444412_104227 | SAMN05444412_104232 | Hypothetical protein. | Hypothetical protein. | 0.488 |
SDY99525.1 | SDY99501.1 | SAMN05444412_104228 | SAMN05444412_104227 | ABC transporter. | Hypothetical protein. | 0.623 |
SDY99525.1 | SDY99548.1 | SAMN05444412_104228 | SAMN05444412_104229 | ABC transporter. | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase. | 0.798 |
SDY99525.1 | SDY99566.1 | SAMN05444412_104228 | SAMN05444412_104230 | ABC transporter. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.797 |
SDY99525.1 | SDY99589.1 | SAMN05444412_104228 | SAMN05444412_104231 | ABC transporter. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase. | 0.683 |
SDY99525.1 | SDY99616.1 | SAMN05444412_104228 | SAMN05444412_104232 | ABC transporter. | Hypothetical protein. | 0.632 |
SDY99548.1 | SDY99501.1 | SAMN05444412_104229 | SAMN05444412_104227 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase. | Hypothetical protein. | 0.623 |
SDY99548.1 | SDY99525.1 | SAMN05444412_104229 | SAMN05444412_104228 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase. | ABC transporter. | 0.798 |
SDY99548.1 | SDY99566.1 | SAMN05444412_104229 | SAMN05444412_104230 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.999 |
SDY99548.1 | SDY99589.1 | SAMN05444412_104229 | SAMN05444412_104231 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase. | 0.993 |
SDY99548.1 | SDY99616.1 | SAMN05444412_104229 | SAMN05444412_104232 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase. | Hypothetical protein. | 0.645 |
SDY99566.1 | SDY99501.1 | SAMN05444412_104230 | SAMN05444412_104227 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | Hypothetical protein. | 0.623 |
SDY99566.1 | SDY99525.1 | SAMN05444412_104230 | SAMN05444412_104228 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | ABC transporter. | 0.797 |
SDY99566.1 | SDY99548.1 | SAMN05444412_104230 | SAMN05444412_104229 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase. | 0.999 |
SDY99566.1 | SDY99589.1 | SAMN05444412_104230 | SAMN05444412_104231 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase. | 0.996 |
SDY99566.1 | SDY99616.1 | SAMN05444412_104230 | SAMN05444412_104232 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | Hypothetical protein. | 0.667 |
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