STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ00892.1CDP-diacylglycerol---serine O-phosphatidyltransferase. (231 aa)    
Predicted Functional Partners:
SDY68542.1
Phosphatidylserine decarboxylase.
 
 
 0.979
SDY68593.1
Phosphatidate cytidylyltransferase.
    
 0.890
SDY99300.1
Cystathionine beta-synthase.
     
 0.854
SDZ00913.1
Glyoxylase, beta-lactamase superfamily II.
  
    0.812
SDZ00870.1
Peptidase family C25.
       0.793
SDZ00855.1
Hypothetical protein.
       0.792
SDZ00833.1
Predicted Zn-dependent peptidase.
       0.791
SDZ37066.1
Phospholipid N-methyltransferase.
 
  
 0.689
SDZ00933.1
Glycine/D-amino acid oxidase.
       0.596
SDZ36855.1
Alanine or glycine:cation symporter, AGCS family.
    
  0.578
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.