STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ01285.1dUTP pyrophosphatase. (144 aa)    
Predicted Functional Partners:
SDZ56375.1
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase.
 
 
 0.985
SDZ05226.1
Thymidylate synthase.
  
 0.897
SDZ57112.1
Ribonucleoside-diphosphate reductase alpha chain.
  
 
 0.895
SDY52213.1
Thymidine kinase.
   
 
 0.877
SDZ45614.1
DNA polymerase III, beta subunit.
  
  
 0.839
SDZ34937.1
dCMP deaminase.
  
 0.775
SDY41389.1
Nucleoside diphosphate kinase.
   
 
 0.774
SDY64993.1
XTP/dITP diphosphohydrolase.
   
 0.715
SDY72393.1
Adenylate kinase.
   
 0.669
SDY84945.1
Dihydrofolate reductase.
  
 
 0.631
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.