STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY96230.1Histidine kinase. (354 aa)    
Predicted Functional Partners:
SDY96251.1
Two component transcriptional regulator, LytTR family.
  0.965
SDY44682.1
Two component transcriptional regulator, LytTR family.
 
  0.873
SDY66673.1
Two component transcriptional regulator, LytTR family.
  
  0.867
SDZ24944.1
Two component transcriptional regulator, LytTR family.
 
  0.853
SDZ23560.1
Two component transcriptional regulator, LytTR family.
 
  0.853
SDZ54303.1
Two component transcriptional regulator, LytTR family.
  
  0.852
SDZ56294.1
Two component transcriptional regulator, LytTR family.
  
  0.852
SDZ38449.1
Two component transcriptional regulator, LytTR family.
  
  0.851
SDY96205.1
Cell wall-active antibiotics response 4TMS YvqF.
 
     0.825
SDY44643.1
Two component transcriptional regulator, LytTR family.
  
  0.673
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.