STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY96730.1Putative ABC transport system permease protein. (407 aa)    
Predicted Functional Partners:
SDY96703.1
Putative ABC transport system ATP-binding protein.
  0.966
SDY96754.1
Hypothetical protein.
 
    0.900
SDY63690.1
Hypothetical protein.
 
    0.786
SDY96676.1
Signal transduction histidine kinase.
       0.773
SDZ04917.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
  
  0.750
SDY88394.1
Putative ABC transport system ATP-binding protein.
 
  0.726
SDY50319.1
Membrane fusion protein, multidrug efflux system.
   
  0.710
SDY75339.1
RND family efflux transporter, MFP subunit.
   
  0.710
SDZ00500.1
Membrane fusion protein, Cu(I)/Ag(I) efflux system.
   
  0.710
SDZ07521.1
RND family efflux transporter, MFP subunit.
   
  0.710
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.