STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ06780.1Heparinase II/III N-terminus. (530 aa)    
Predicted Functional Partners:
SDZ06800.1
Hypothetical protein.
     0.945
SDZ06816.1
Capsule assembly protein Wzi.
       0.762
SDY46347.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing).
 
     0.634
SDZ56201.1
Arylsulfatase A.
    
  0.598
SDY63386.1
Glycosyltransferase involved in cell wall bisynthesis.
     0.558
SDZ06687.1
O-Antigen ligase.
       0.448
SDZ06617.1
Serine O-acetyltransferase.
       0.443
SDZ06758.1
Serine O-acetyltransferase.
       0.443
SDZ06636.1
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.425
SDZ06706.1
Hexapeptide repeat of succinyl-transferase.
       0.423
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.