Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY51059.1 | SDY98779.1 | SAMN05444412_101375 | SAMN05444412_104195 | Ferrochelatase. | Oxygen-independent coproporphyrinogen-3 oxidase. | 0.425 |
SDY51059.1 | SDZ08001.1 | SAMN05444412_101375 | SAMN05444412_105207 | Ferrochelatase. | Menaquinone-dependent protoporphyrinogen oxidase. | 0.618 |
SDY51059.1 | SDZ36572.1 | SAMN05444412_101375 | SAMN05444412_111117 | Ferrochelatase. | Coproporphyrinogen oxidase. | 0.730 |
SDY51059.1 | SDZ50325.1 | SAMN05444412_101375 | SAMN05444412_11838 | Ferrochelatase. | Protoporphyrinogen oxidase. | 0.913 |
SDY67722.1 | SDY98779.1 | SAMN05444412_102200 | SAMN05444412_104195 | Oxygen-independent coproporphyrinogen-3 oxidase. | Oxygen-independent coproporphyrinogen-3 oxidase. | 0.888 |
SDY67722.1 | SDZ08001.1 | SAMN05444412_102200 | SAMN05444412_105207 | Oxygen-independent coproporphyrinogen-3 oxidase. | Menaquinone-dependent protoporphyrinogen oxidase. | 0.529 |
SDY67722.1 | SDZ36572.1 | SAMN05444412_102200 | SAMN05444412_111117 | Oxygen-independent coproporphyrinogen-3 oxidase. | Coproporphyrinogen oxidase. | 0.877 |
SDY67722.1 | SDZ50325.1 | SAMN05444412_102200 | SAMN05444412_11838 | Oxygen-independent coproporphyrinogen-3 oxidase. | Protoporphyrinogen oxidase. | 0.609 |
SDY86336.1 | SDZ08001.1 | SAMN05444412_103186 | SAMN05444412_105207 | Fructose-bisphosphate aldolase. | Menaquinone-dependent protoporphyrinogen oxidase. | 0.432 |
SDY98779.1 | SDY51059.1 | SAMN05444412_104195 | SAMN05444412_101375 | Oxygen-independent coproporphyrinogen-3 oxidase. | Ferrochelatase. | 0.425 |
SDY98779.1 | SDY67722.1 | SAMN05444412_104195 | SAMN05444412_102200 | Oxygen-independent coproporphyrinogen-3 oxidase. | Oxygen-independent coproporphyrinogen-3 oxidase. | 0.888 |
SDY98779.1 | SDZ08001.1 | SAMN05444412_104195 | SAMN05444412_105207 | Oxygen-independent coproporphyrinogen-3 oxidase. | Menaquinone-dependent protoporphyrinogen oxidase. | 0.587 |
SDY98779.1 | SDZ36572.1 | SAMN05444412_104195 | SAMN05444412_111117 | Oxygen-independent coproporphyrinogen-3 oxidase. | Coproporphyrinogen oxidase. | 0.877 |
SDY98779.1 | SDZ50325.1 | SAMN05444412_104195 | SAMN05444412_11838 | Oxygen-independent coproporphyrinogen-3 oxidase. | Protoporphyrinogen oxidase. | 0.609 |
SDZ07981.1 | SDZ08001.1 | SAMN05444412_105206 | SAMN05444412_105207 | Ethylbenzene dehydrogenase. | Menaquinone-dependent protoporphyrinogen oxidase. | 0.486 |
SDZ08001.1 | SDY51059.1 | SAMN05444412_105207 | SAMN05444412_101375 | Menaquinone-dependent protoporphyrinogen oxidase. | Ferrochelatase. | 0.618 |
SDZ08001.1 | SDY67722.1 | SAMN05444412_105207 | SAMN05444412_102200 | Menaquinone-dependent protoporphyrinogen oxidase. | Oxygen-independent coproporphyrinogen-3 oxidase. | 0.529 |
SDZ08001.1 | SDY86336.1 | SAMN05444412_105207 | SAMN05444412_103186 | Menaquinone-dependent protoporphyrinogen oxidase. | Fructose-bisphosphate aldolase. | 0.432 |
SDZ08001.1 | SDY98779.1 | SAMN05444412_105207 | SAMN05444412_104195 | Menaquinone-dependent protoporphyrinogen oxidase. | Oxygen-independent coproporphyrinogen-3 oxidase. | 0.587 |
SDZ08001.1 | SDZ07981.1 | SAMN05444412_105207 | SAMN05444412_105206 | Menaquinone-dependent protoporphyrinogen oxidase. | Ethylbenzene dehydrogenase. | 0.486 |
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