STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ04939.1Lipoprotein-releasing system permease protein. (419 aa)    
Predicted Functional Partners:
SDZ04952.1
Lipoprotein-releasing system ATP-binding protein.
 
  0.997
SDZ04917.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
 
 
  0.962
SDZ27917.1
Lipoprotein-releasing system ATP-binding protein.
 
  0.959
SDY96703.1
Putative ABC transport system ATP-binding protein.
   
  0.942
SDZ18869.1
Putative ABC transport system ATP-binding protein.
   
  0.804
SDY88394.1
Putative ABC transport system ATP-binding protein.
  
  0.785
SDY52909.1
Putative ABC transport system ATP-binding protein.
  
  0.769
SDZ18447.1
ABC-type lipoprotein export system, ATPase component.
   
  0.748
SDY54139.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.722
SDZ18828.1
ABC-type transport system, involved in lipoprotein release, permease component.
  
 
 0.588
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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