STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ19389.1Acetyltransferase (GNAT) family protein. (149 aa)    
Predicted Functional Partners:
SDZ18981.1
phosphoribosyl-ATP pyrophosphatase.
    
  0.631
SDZ07700.1
methionyl-tRNA synthetase.
    
  0.602
SDZ18998.1
Cyclase.
    
  0.555
SDZ19029.1
Imidazole glycerol phosphate synthase subunit hisH.
    
  0.555
SDZ19367.1
Hypothetical protein.
       0.535
SDZ12503.1
cysteinyl-tRNA synthetase.
     
 0.532
SDY41838.1
3-hydroxyanthranilate 3,4-dioxygenase.
    
  0.416
SDY89611.1
Mannose-6-phosphate isomerase, type 2.
    
  0.416
SDZ08302.1
Mannose-6-phosphate isomerase, cupin superfamily.
    
  0.416
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.