STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ18496.1Putative ABC transport system permease protein. (840 aa)    
Predicted Functional Partners:
SDZ18447.1
ABC-type lipoprotein export system, ATPase component.
 
 0.998
SDZ18869.1
Putative ABC transport system ATP-binding protein.
 
 0.998
SDY52909.1
Putative ABC transport system ATP-binding protein.
 
 0.995
SDY88394.1
Putative ABC transport system ATP-binding protein.
 
 0.995
SDY96703.1
Putative ABC transport system ATP-binding protein.
  
 0.994
SDZ04952.1
Lipoprotein-releasing system ATP-binding protein.
  
 0.994
SDZ27917.1
Lipoprotein-releasing system ATP-binding protein.
  
 0.994
SDZ18902.1
HlyD family secretion protein.
 
 0.966
SDY50319.1
Membrane fusion protein, multidrug efflux system.
  
 0.856
SDY75339.1
RND family efflux transporter, MFP subunit.
  
 0.856
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.