STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ28949.1Lactate permease. (486 aa)    
Predicted Functional Partners:
SDZ14444.1
L-lactate dehydrogenase complex protein LldF.
 
  
 0.829
SDZ38115.1
Fe-S oxidoreductase.
 
  
 0.735
SDZ14422.1
L-lactate dehydrogenase complex protein LldE.
 
  
 0.521
SDZ14469.1
L-lactate dehydrogenase complex protein LldG.
 
  
 0.453
SDZ56311.1
Malate dehydrogenase (NAD).
  
  
 0.439
SDZ28934.1
Por secretion system C-terminal sorting domain-containing protein.
       0.407
SDZ28966.1
AsmA-like C-terminal region.
       0.406
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.