STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ28696.1Nitrous oxide reductase apoprotein. (652 aa)    
Predicted Functional Partners:
SDZ28615.1
Cu-processing system permease protein.
 
 
 0.968
SDZ28630.1
Cu-processing system ATP-binding protein.
 
 
 0.953
SDZ28711.1
Cytochrome c.
 
 
 0.953
SDZ28649.1
Nitrous oxidase accessory protein.
 
  
 0.941
SDZ28664.1
Copper chaperone NosL.
 
  
 0.941
SDZ28679.1
Copper chaperone NosL.
 
  
 0.935
SDZ28724.1
Regulator of cell morphogenesis and NO signaling.
 
    0.838
SDZ51075.1
Cytochrome c oxidase cbb3-type subunit 2.
 
 
 0.797
SDZ45590.1
ABC-2 type transport system permease protein.
  
 
 0.746
SDZ28735.1
Transcriptional regulator, BadM/Rrf2 family.
 
   
 0.724
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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