STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ31350.1Mn2+ and Fe2+ transporters of the NRAMP family. (403 aa)    
Predicted Functional Partners:
SDZ31310.1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
 
     0.898
SDZ31330.1
Nucleoside-diphosphate-sugar epimerase.
 
     0.895
SDZ31366.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
     0.809
SDZ31384.1
BNR repeat-containing family member.
       0.773
SDZ31269.1
Glycosyl Hydrolase Family 88.
       0.714
SDZ31288.1
Hypothetical protein.
       0.714
SDZ31401.1
RagB/SusD domain-containing protein.
 
     0.562
SDZ31420.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.558
SDZ43055.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.554
SDZ43130.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.495
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.