SDZ32080.1 protein (Rhodonellum ikkaensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

SDZ32080.1

Uncharacterized protein. (443 aa)

Predicted Functional Partners:

SDZ32113.1

0.555

SDZ32062.1

0.501

SDZ32096.1

0.494

SDY68724.1

0.434

SDY98963.1

0.403

Your Current Organism:

Rhodonellum ikkaensis

NCBI taxonomy Id: 336829
Other names: R. ikkaensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDY68724.1	SDZ32080.1	SAMN05444412_102238	SAMN05444412_11055	Peptidase family M23.	Uncharacterized protein.	0.434
SDY98963.1	SDZ32080.1	SAMN05444412_104204	SAMN05444412_11055	Amidohydrolase family protein.	Uncharacterized protein.	0.403
SDZ32062.1	SDZ32080.1	SAMN05444412_11054	SAMN05444412_11055	Conserved hypothetical protein.	Uncharacterized protein.	0.501
SDZ32080.1	SDY68724.1	SAMN05444412_11055	SAMN05444412_102238	Uncharacterized protein.	Peptidase family M23.	0.434
SDZ32080.1	SDY98963.1	SAMN05444412_11055	SAMN05444412_104204	Uncharacterized protein.	Amidohydrolase family protein.	0.403
SDZ32080.1	SDZ32062.1	SAMN05444412_11055	SAMN05444412_11054	Uncharacterized protein.	Conserved hypothetical protein.	0.501
SDZ32080.1	SDZ32096.1	SAMN05444412_11055	SAMN05444412_11056	Uncharacterized protein.	Hypothetical protein.	0.494
SDZ32080.1	SDZ32113.1	SAMN05444412_11055	SAMN05444412_11057	Uncharacterized protein.	Two-component sensor histidine kinase, contains HisKA and HATPase domains.	0.555
SDZ32096.1	SDZ32080.1	SAMN05444412_11056	SAMN05444412_11055	Hypothetical protein.	Uncharacterized protein.	0.494
SDZ32096.1	SDZ32113.1	SAMN05444412_11056	SAMN05444412_11057	Hypothetical protein.	Two-component sensor histidine kinase, contains HisKA and HATPase domains.	0.528
SDZ32113.1	SDZ32080.1	SAMN05444412_11057	SAMN05444412_11055	Two-component sensor histidine kinase, contains HisKA and HATPase domains.	Uncharacterized protein.	0.555
SDZ32113.1	SDZ32096.1	SAMN05444412_11057	SAMN05444412_11056	Two-component sensor histidine kinase, contains HisKA and HATPase domains.	Hypothetical protein.	0.528