STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ37128.1Hypothetical protein. (532 aa)    
Predicted Functional Partners:
SDZ37116.1
Hypothetical protein.
 
     0.949
SDZ37101.1
Outer membrane protein, YaiO family.
 
     0.933
SDZ37091.1
Hypothetical protein.
 
     0.928
SDZ37141.1
Response regulator receiver domain-containing protein.
 
     0.828
SDZ37078.1
Uncharacterized sulfatase.
 
     0.775
SDY85773.1
Translation elongation factor P (EF-P).
  
 0.752
SDZ12675.1
Hypothetical protein.
  
    0.741
SDZ12656.1
Hypothetical protein.
  
     0.725
SDY55133.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.689
SDY50072.1
Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein.
  
     0.686
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.