STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ35487.1Bacteriophage holin family protein. (171 aa)    
Predicted Functional Partners:
SDZ35521.1
Phage portal protein, HK97 family.
       0.705
SDZ35539.1
Hypothetical protein.
       0.705
SDZ35469.1
Peptidase M15.
       0.613
SDZ35383.1
Hypothetical protein.
       0.592
SDZ35399.1
Hypothetical protein.
       0.592
SDZ35417.1
Hypothetical protein.
       0.592
SDZ35439.1
Hypothetical protein.
       0.592
SDZ35452.1
Hypothetical protein.
       0.592
SDZ35557.1
Phage major capsid protein, HK97 family.
       0.534
SDZ35344.1
Phage terminase, small subunit, putative, P27 family.
       0.488
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.