Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY41490.1 | SDY65500.1 | SAMN05444412_10183 | SAMN05444412_102122 | 16S rRNA (cytosine967-C5)-methyltransferase. | [LSU ribosomal protein L11P]-lysine N-methyltransferase. | 0.490 |
SDY41490.1 | SDZ41198.1 | SAMN05444412_10183 | SAMN05444412_113100 | 16S rRNA (cytosine967-C5)-methyltransferase. | 23S rRNA m(5)U-1939 methyltransferase. | 0.446 |
SDY41490.1 | SDZ50494.1 | SAMN05444412_10183 | SAMN05444412_11856 | 16S rRNA (cytosine967-C5)-methyltransferase. | tRNA (guanine-N(7)-)-methyltransferase. | 0.543 |
SDY65500.1 | SDY41490.1 | SAMN05444412_102122 | SAMN05444412_10183 | [LSU ribosomal protein L11P]-lysine N-methyltransferase. | 16S rRNA (cytosine967-C5)-methyltransferase. | 0.490 |
SDY65500.1 | SDZ41198.1 | SAMN05444412_102122 | SAMN05444412_113100 | [LSU ribosomal protein L11P]-lysine N-methyltransferase. | 23S rRNA m(5)U-1939 methyltransferase. | 0.430 |
SDZ05139.1 | SDZ41198.1 | SAMN05444412_10550 | SAMN05444412_113100 | Septum formation protein. | 23S rRNA m(5)U-1939 methyltransferase. | 0.782 |
SDZ41174.1 | SDZ41185.1 | SAMN05444412_11398 | SAMN05444412_11399 | Protein of unknown function. | Short-chain dehydrogenase. | 0.773 |
SDZ41174.1 | SDZ41198.1 | SAMN05444412_11398 | SAMN05444412_113100 | Protein of unknown function. | 23S rRNA m(5)U-1939 methyltransferase. | 0.509 |
SDZ41174.1 | SDZ41212.1 | SAMN05444412_11398 | SAMN05444412_113101 | Protein of unknown function. | Hypothetical protein. | 0.800 |
SDZ41185.1 | SDZ41174.1 | SAMN05444412_11399 | SAMN05444412_11398 | Short-chain dehydrogenase. | Protein of unknown function. | 0.773 |
SDZ41185.1 | SDZ41198.1 | SAMN05444412_11399 | SAMN05444412_113100 | Short-chain dehydrogenase. | 23S rRNA m(5)U-1939 methyltransferase. | 0.524 |
SDZ41185.1 | SDZ41212.1 | SAMN05444412_11399 | SAMN05444412_113101 | Short-chain dehydrogenase. | Hypothetical protein. | 0.509 |
SDZ41198.1 | SDY41490.1 | SAMN05444412_113100 | SAMN05444412_10183 | 23S rRNA m(5)U-1939 methyltransferase. | 16S rRNA (cytosine967-C5)-methyltransferase. | 0.446 |
SDZ41198.1 | SDY65500.1 | SAMN05444412_113100 | SAMN05444412_102122 | 23S rRNA m(5)U-1939 methyltransferase. | [LSU ribosomal protein L11P]-lysine N-methyltransferase. | 0.430 |
SDZ41198.1 | SDZ05139.1 | SAMN05444412_113100 | SAMN05444412_10550 | 23S rRNA m(5)U-1939 methyltransferase. | Septum formation protein. | 0.782 |
SDZ41198.1 | SDZ41174.1 | SAMN05444412_113100 | SAMN05444412_11398 | 23S rRNA m(5)U-1939 methyltransferase. | Protein of unknown function. | 0.509 |
SDZ41198.1 | SDZ41185.1 | SAMN05444412_113100 | SAMN05444412_11399 | 23S rRNA m(5)U-1939 methyltransferase. | Short-chain dehydrogenase. | 0.524 |
SDZ41198.1 | SDZ41212.1 | SAMN05444412_113100 | SAMN05444412_113101 | 23S rRNA m(5)U-1939 methyltransferase. | Hypothetical protein. | 0.793 |
SDZ41198.1 | SDZ50246.1 | SAMN05444412_113100 | SAMN05444412_11832 | 23S rRNA m(5)U-1939 methyltransferase. | RNA methyltransferase, TrmH family. | 0.445 |
SDZ41198.1 | SDZ50494.1 | SAMN05444412_113100 | SAMN05444412_11856 | 23S rRNA m(5)U-1939 methyltransferase. | tRNA (guanine-N(7)-)-methyltransferase. | 0.471 |
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