STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ41276.1Iron-sulfur cluster assembly protein. (108 aa)    
Predicted Functional Partners:
SDZ53711.1
Cysteine desulfurase IscS.
 
 
 0.712
SDY40603.1
Cysteine desulfurase.
 
 
 0.687
SDZ11731.1
Molecular chaperone DnaK.
  
 0.627
SDY68774.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
 
 
 0.606
SDZ41264.1
methylmalonyl-CoA epimerase.
  
    0.600
SDZ56580.1
Iron-regulated ABC transporter ATPase subunit SufC.
  
 
 0.585
SDZ41238.1
Thiamine-phosphate kinase.
       0.574
SDY86681.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
  
 
 0.554
SDZ41250.1
Hypothetical protein.
       0.544
SDZ56573.1
Iron-regulated ABC transporter membrane component SufB.
  
 
 0.532
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.