STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ40633.1EpsG family protein. (411 aa)    
Predicted Functional Partners:
SDZ40642.1
Hypothetical protein.
       0.752
SDZ40652.1
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.752
SDZ40624.1
Hypothetical protein.
       0.584
SDZ40613.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.558
SDZ40577.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.550
SDZ40589.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.550
SDZ40601.1
Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family.
       0.550
SDZ40553.1
Sugar-transfer associated ATP-grasp.
       0.547
SDZ40565.1
Hypothetical protein.
       0.547
SDZ40660.1
N-acylneuraminate cytidylyltransferase.
       0.438
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.