STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ43677.1L-proline dehydrogenase. (447 aa)    
Predicted Functional Partners:
SDZ12194.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
 0.907
SDY42325.1
Glutamate synthase (NADH) large subunit.
   
 
 0.905
SDZ04985.1
Pyrroline-5-carboxylate reductase.
   
 0.898
SDZ58589.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
     
 0.886
SDZ46914.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
 0.763
SDZ52553.1
UPF0271 protein.
   
 
  0.760
SDZ07438.1
Phosphoribosylformylglycinamidine synthase.
    
  0.715
SDY55188.1
Glycine dehydrogenase (decarboxylating) alpha subunit /glycine dehydrogenase (decarboxylating) beta subunit.
   
 
 0.714
SDY98337.1
Cytochrome c oxidase subunit 2.
    
 0.628
SDZ44859.1
Transporter, SSS family.
 
  
 0.627
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.