STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ42742.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (209 aa)    
Predicted Functional Partners:
SDZ42758.1
Hypothetical protein.
       0.773
SDZ42768.1
Hypothetical protein.
       0.718
SDZ25155.1
Luciferase family oxidoreductase, group 1.
  
 
 0.679
SDZ42783.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.679
SDZ20121.1
TIGR03643 family protein.
 
     0.607
SDZ45641.1
Hypothetical protein.
  
 
 0.597
SDZ42976.1
Amino acid adenylation domain-containing protein.
     
 0.587
SDY81577.1
Riboflavin kinase / FMN adenylyltransferase.
    
  0.555
SDZ28159.1
4,5-DOPA dioxygenase extradiol.
  
 
 0.542
SDZ42726.1
Putative mRNA 3-end processing factor.
       0.532
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.