STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ42929.1Pyridine nucleotide-disulphide oxidoreductase. (455 aa)    
Predicted Functional Partners:
SDZ42941.1
4Fe-4S binding domain-containing protein.
 
     0.950
SDZ42920.1
Protein of unknown function, DUF547.
 
     0.933
SDZ42954.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
    0.927
SDY42325.1
Glutamate synthase (NADH) large subunit.
    
 0.915
SDZ42965.1
Glycosyl transferase family 2.
 
    0.889
SDZ46914.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 0.889
SDZ25941.1
Hydroxyacylglutathione hydrolase.
   
 0.884
SDY74979.1
SSU ribosomal protein S5P.
   
  0.872
SDY68947.1
SSU ribosomal protein S16P.
   
  0.863
SDY95959.1
Small subunit ribosomal protein S9.
   
 0.861
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.