STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ46172.13-isopropylmalate/(R)-2-methylmalate dehydratase small subunit. (196 aa)    
Predicted Functional Partners:
SDZ46155.1
3-isopropylmalate dehydratase, large subunit.
 0.999
SDZ46203.1
3-isopropylmalate dehydrogenase.
 
 0.998
SDZ46140.1
2-isopropylmalate synthase.
 
 
 0.997
SDZ46188.1
(R)-citramalate synthase.
 
 
 0.995
SDZ46124.1
Ketol-acid reductoisomerase.
 
  
 0.980
SDZ46093.1
Acetolactate synthase, large subunit.
 
 
 0.978
SDZ46110.1
Acetolactate synthase, small subunit.
 
 
 0.971
SDZ46077.1
Dihydroxy-acid dehydratase.
 
  
 0.965
SDZ01343.1
Isocitrate dehydrogenase.
 
 
 0.879
SDZ32485.1
Isocitrate dehydrogenase.
 
 
 0.879
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.