STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ50319.1Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. (461 aa)    
Predicted Functional Partners:
SDY89105.1
4Fe-4S dicluster domain-containing protein.
   
 0.996
SDZ17120.1
NADH-quinone oxidoreductase subunit F.
   
 0.994
SDZ53455.1
Deoxyadenosine/deoxycytidine kinase.
   
 0.986
SDZ39352.1
Rieske [2Fe-2S] domain-containing protein.
   
 0.959
SDZ52235.1
Rieske [2Fe-2S] domain-containing protein.
   
 0.959
SDZ42987.1
Amino acid adenylation domain-containing protein.
   
 0.925
SDZ43000.1
Amino acid adenylation domain-containing protein.
   
 0.925
SDZ04632.1
Acyl carrier protein.
   
 0.914
SDZ05788.1
Acyl carrier protein.
   
 0.914
SDZ20485.1
Acyl carrier protein.
   
 0.914
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.