STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ50670.1Hypothetical protein. (744 aa)    
Predicted Functional Partners:
SDY86045.1
Polyphosphate:nucleotide phosphotransferase, PPK2 family.
   
    0.736
SDZ54224.1
Tetratricopeptide repeat-containing protein.
  
 
  0.628
SDZ11639.1
Uroporphyrinogen decarboxylase.
     
 0.627
SDY98655.1
Cytochrome c oxidase cbb3-type subunit I/II.
   
  
 0.518
SDY64138.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
   
 
 0.487
SDZ13021.1
4-hydroxybenzoate polyprenyltransferase.
   
 
 0.487
SDZ12446.1
4-hydroxybenzoate polyprenyltransferase.
   
 
 0.487
SDZ40940.1
Uncharacterized conserved protein.
  
     0.403
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.