STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ53375.1Gamma-glutamyltranspeptidase / glutathione hydrolase. (571 aa)    
Predicted Functional Partners:
SDY42325.1
Glutamate synthase (NADH) large subunit.
     
 0.913
SDZ50391.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
  
  
 
0.779
SDZ53383.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
       0.773
SDY89691.1
Glutamine synthetase.
 
  
  0.734
SDZ56667.1
Leucyl aminopeptidase.
     
 0.726
SDZ33390.1
Carboxylate-amine ligase.
    
 0.714
SDY68566.1
Glutamate dehydrogenase (NAD(P)+).
     
 0.697
SDZ07438.1
Phosphoribosylformylglycinamidine synthase.
    
  0.630
SDY90489.1
Glutathione peroxidase.
     
 0.625
SDY82276.1
Glutathione peroxidase.
     
 0.625
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.