STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ53517.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
SDZ53527.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
       0.778
SDY97711.1
Hypothetical protein.
  
     0.775
SDY99403.1
Hypothetical protein.
  
     0.775
SDY52154.1
Hypothetical protein.
  
     0.774
SDY97186.1
Hypothetical protein.
  
     0.773
SDY39375.1
Hypothetical protein.
  
     0.772
SDY72185.1
Hypothetical protein.
  
     0.766
SDY88711.1
Hypothetical protein.
  
     0.766
SDZ41212.1
Hypothetical protein.
  
     0.766
SDZ54676.1
Hypothetical protein.
  
     0.762
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.