Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY64898.1 | SDY86574.1 | SAMN05444412_102102 | SAMN05444412_103195 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II. | 0.999 |
SDY64898.1 | SDZ54265.1 | SAMN05444412_102102 | SAMN05444412_12223 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase. | Protein of unknown function. | 0.510 |
SDY86574.1 | SDY64898.1 | SAMN05444412_103195 | SAMN05444412_102102 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase. | 0.999 |
SDY86574.1 | SDZ54224.1 | SAMN05444412_103195 | SAMN05444412_12220 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II. | Tetratricopeptide repeat-containing protein. | 0.913 |
SDY86574.1 | SDZ54265.1 | SAMN05444412_103195 | SAMN05444412_12223 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II. | Protein of unknown function. | 0.465 |
SDZ54224.1 | SDY86574.1 | SAMN05444412_12220 | SAMN05444412_103195 | Tetratricopeptide repeat-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II. | 0.913 |
SDZ54224.1 | SDZ54238.1 | SAMN05444412_12220 | SAMN05444412_12221 | Tetratricopeptide repeat-containing protein. | DNA recombination protein RmuC. | 0.811 |
SDZ54224.1 | SDZ54249.1 | SAMN05444412_12220 | SAMN05444412_12222 | Tetratricopeptide repeat-containing protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.814 |
SDZ54224.1 | SDZ54265.1 | SAMN05444412_12220 | SAMN05444412_12223 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.443 |
SDZ54224.1 | SDZ54278.1 | SAMN05444412_12220 | SAMN05444412_12224 | Tetratricopeptide repeat-containing protein. | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | 0.469 |
SDZ54238.1 | SDZ54224.1 | SAMN05444412_12221 | SAMN05444412_12220 | DNA recombination protein RmuC. | Tetratricopeptide repeat-containing protein. | 0.811 |
SDZ54238.1 | SDZ54249.1 | SAMN05444412_12221 | SAMN05444412_12222 | DNA recombination protein RmuC. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.773 |
SDZ54238.1 | SDZ54265.1 | SAMN05444412_12221 | SAMN05444412_12223 | DNA recombination protein RmuC. | Protein of unknown function. | 0.443 |
SDZ54238.1 | SDZ54278.1 | SAMN05444412_12221 | SAMN05444412_12224 | DNA recombination protein RmuC. | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | 0.443 |
SDZ54249.1 | SDZ54224.1 | SAMN05444412_12222 | SAMN05444412_12220 | Pimeloyl-ACP methyl ester carboxylesterase. | Tetratricopeptide repeat-containing protein. | 0.814 |
SDZ54249.1 | SDZ54238.1 | SAMN05444412_12222 | SAMN05444412_12221 | Pimeloyl-ACP methyl ester carboxylesterase. | DNA recombination protein RmuC. | 0.773 |
SDZ54249.1 | SDZ54265.1 | SAMN05444412_12222 | SAMN05444412_12223 | Pimeloyl-ACP methyl ester carboxylesterase. | Protein of unknown function. | 0.443 |
SDZ54249.1 | SDZ54278.1 | SAMN05444412_12222 | SAMN05444412_12224 | Pimeloyl-ACP methyl ester carboxylesterase. | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | 0.443 |
SDZ54265.1 | SDY64898.1 | SAMN05444412_12223 | SAMN05444412_102102 | Protein of unknown function. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase. | 0.510 |
SDZ54265.1 | SDY86574.1 | SAMN05444412_12223 | SAMN05444412_103195 | Protein of unknown function. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II. | 0.465 |
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