STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ55835.1Holliday junction endonuclease RuvC. (192 aa)    
Predicted Functional Partners:
SDZ01083.1
Holliday junction DNA helicase subunit RuvA.
 0.997
SDY66881.1
Holliday junction DNA helicase subunit RuvB.
 
 0.974
SDY64214.1
Excinuclease ABC subunit A.
  
 
 0.769
SDY44744.1
Excinuclease ABC subunit A.
  
 
 0.763
SDY67969.1
Excinuclease ABC subunit C.
  
  
 0.747
SDY69102.1
Excinuclease ABC subunit B.
     
 0.745
SDZ54372.1
DNA polymerase-3 subunit epsilon.
  
 
 0.736
SDZ11452.1
Magnesium chelatase family protein.
  
   
 0.664
SDZ55845.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
       0.620
SDY65443.1
Regulatory protein.
 
  
 0.615
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.