STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ55917.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
SDY95959.1
Small subunit ribosomal protein S9.
    
 0.971
SDY74411.1
SSU ribosomal protein S12P.
    
 0.969
SDY74489.1
SSU ribosomal protein S10P.
   
  0.969
SDY74979.1
SSU ribosomal protein S5P.
    
 0.969
SDY75210.1
SSU ribosomal protein S4P.
   
  0.969
SDZ53166.1
SSU ribosomal protein S15P.
   
  0.969
SDY74432.1
SSU ribosomal protein S7P.
    
  0.968
SDY74540.1
LSU ribosomal protein L4P.
    
  0.968
SDY74628.1
SSU ribosomal protein S19P.
    
  0.968
SDY74678.1
SSU ribosomal protein S3P.
    
  0.968
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.