STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ55757.1Succinate dehydrogenase subunit A. (644 aa)    
Predicted Functional Partners:
SDZ55769.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
 0.999
SDZ25192.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
 0.998
SDZ55744.1
Succinate dehydrogenase / fumarate reductase cytochrome b subunit.
 
 
 0.998
SDY49625.1
Fumarase, class II.
 
 0.977
SDZ27899.1
succinyl-CoA synthetase beta subunit.
 
 0.975
SDY96625.1
succinyl-CoA synthetase alpha subunit.
 
 0.969
SDZ17120.1
NADH-quinone oxidoreductase subunit F.
  
 0.948
SDY89105.1
4Fe-4S dicluster domain-containing protein.
  
 0.895
SDZ56620.1
Citrate synthase.
  
 0.894
SDZ58589.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
     
 0.888
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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