STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ56201.1Arylsulfatase A. (565 aa)    
Predicted Functional Partners:
SDZ32434.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
   0.881
SDZ14337.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
  
 0.838
SDY66210.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
   0.813
SDY67857.1
Gliding motility-associated lipoprotein GldK/gliding motility-associated lipoprotein GldK,TIGR03529.
 
   0.800
SDY64425.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
  0.799
SDY84485.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
  0.799
SDY94840.1
3-oxoacyl-[acyl-carrier-protein] reductase.
   
  0.799
SDY99026.1
Benzil reductase ((S)-benzoin forming).
   
  0.799
SDZ00398.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
  0.799
SDZ05825.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
  0.799
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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