STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ57703.1MFS transporter, NNP family, nitrate/nitrite transporter. (453 aa)    
Predicted Functional Partners:
SDZ57622.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor.
 
 0.995
SDZ57696.1
Ferredoxin-nitrate reductase.
 
 
 0.993
SDZ57612.1
Nitrite reductase (NADH) small subunit.
 
 
 0.972
SDZ57689.1
Rubredoxin.
 
  
 0.943
SDZ46914.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
     
 0.775
SDZ57711.1
Alginate export.
 
     0.725
SDZ35557.1
Phage major capsid protein, HK97 family.
   
    0.681
SDY46973.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
 
 
 0.660
SDZ53286.1
Oxidoreductase alpha (molybdopterin) subunit.
    
 0.630
SDY98246.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
    
 0.608
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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