STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKO46301.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)    
Predicted Functional Partners:
KKO44408.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.994
KKO47115.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.993
KKO46825.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.981
KKO47335.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.974
KKO44738.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.974
KKO46449.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.963
KKO46305.1
Sodium:proline symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.963
KKO44237.1
Sodium:proline symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.963
KKO44620.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.961
KKO46790.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.929
Your Current Organism:
Arsukibacterium ikkense
NCBI taxonomy Id: 336831
Other names: A. ikkense, Arsukibacterium ikkense Schmidt et al. 2016, DSM 17999, LMG 23455, LMG:23455, strain GCM72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.