STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKO44834.1YafO overproduction induces toxicity; it is believed to be the toxin of a toxin-antitoxin pair; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)    
Predicted Functional Partners:
KKO44833.1
Antitoxin of toxin-antitoxin stability system; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.980
KKO43929.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.493
KKO44831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.476
KKO44832.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.476
KKO47228.1
Antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.454
KKO44288.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.454
KKO43873.1
Antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.454
KKO45889.1
Prevent-host-death protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.431
KKO44295.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.431
Your Current Organism:
Arsukibacterium ikkense
NCBI taxonomy Id: 336831
Other names: A. ikkense, Arsukibacterium ikkense Schmidt et al. 2016, DSM 17999, LMG 23455, LMG:23455, strain GCM72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.