STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKO44865.1Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (653 aa)    
Predicted Functional Partners:
KKO44924.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.796
KKO44864.1
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
 0.635
KKO44863.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.626
murG
UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
     
 0.579
KKO44861.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.561
KKO44925.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.458
KKO44866.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
KKO44867.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
KKO46422.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.453
KKO44868.1
Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
       0.419
Your Current Organism:
Arsukibacterium ikkense
NCBI taxonomy Id: 336831
Other names: A. ikkense, Arsukibacterium ikkense Schmidt et al. 2016, DSM 17999, LMG 23455, LMG:23455, strain GCM72
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