STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_00459Phosphoribosylaminoimidazole-succinocarboxamide synthase. (320 aa)    
Predicted Functional Partners:
UREG_03041
Phosphoribosylformylglycinamidine cyclo-ligase.
 
 0.992
UREG_00756
Phosphoribosylaminoimidazole carboxylase.
   
 
 0.989
UREG_05627
Adenylosuccinate lyase.
  
 0.986
UREG_03948
Phosphoribosylformylglycinamidine synthase.
  
 0.935
UREG_03571
Amidophosphoribosyltransferase.
  
 0.935
UREG_06728
Phosphoribosylglycinamide formyltransferase.
  
 0.917
UREG_01043
Tyrosine--tRNA ligase.
      0.900
UREG_03753
Uncharacterized protein.
  
 0.840
UREG_04751
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
  
 
 0.798
UREG_07615
C-1-tetrahydrofolate synthase.
  
 
 0.763
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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