Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TAH18 | UREG_00738 | C4JN94 | C4JEC2 | NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of DRE2. Positively controls H(2)O(2)-induced cell death; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | UCH_1 domain-containing protein. | 0.506 |
| UREG_00738 | TAH18 | C4JEC2 | C4JN94 | UCH_1 domain-containing protein. | NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of DRE2. Positively controls H(2)O(2)-induced cell death; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.506 |
| UREG_00738 | UREG_01089 | C4JEC2 | C4JG09 | UCH_1 domain-containing protein. | AD domain-containing protein. | 0.408 |
| UREG_00738 | UREG_03913 | C4JEC2 | C4JM55 | UCH_1 domain-containing protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.653 |
| UREG_00738 | UREG_04233 | C4JEC2 | C4JN25 | UCH_1 domain-containing protein. | Uncharacterized protein. | 0.465 |
| UREG_00738 | UREG_06980 | C4JEC2 | C4JWN8 | UCH_1 domain-containing protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.429 |
| UREG_00738 | UREG_07218 | C4JEC2 | C4JYG7 | UCH_1 domain-containing protein. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.457 |
| UREG_01089 | UREG_00738 | C4JG09 | C4JEC2 | AD domain-containing protein. | UCH_1 domain-containing protein. | 0.408 |
| UREG_01089 | UREG_06980 | C4JG09 | C4JWN8 | AD domain-containing protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.869 |
| UREG_03913 | UREG_00738 | C4JM55 | C4JEC2 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | UCH_1 domain-containing protein. | 0.653 |
| UREG_03913 | UREG_04233 | C4JM55 | C4JN25 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | Uncharacterized protein. | 0.997 |
| UREG_03913 | UREG_06980 | C4JM55 | C4JWN8 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.665 |
| UREG_03913 | UREG_07218 | C4JM55 | C4JYG7 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.971 |
| UREG_04233 | UREG_00738 | C4JN25 | C4JEC2 | Uncharacterized protein. | UCH_1 domain-containing protein. | 0.465 |
| UREG_04233 | UREG_03913 | C4JN25 | C4JM55 | Uncharacterized protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.997 |
| UREG_04233 | UREG_06980 | C4JN25 | C4JWN8 | Uncharacterized protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.996 |
| UREG_04233 | UREG_07218 | C4JN25 | C4JYG7 | Uncharacterized protein. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.529 |
| UREG_06980 | UREG_00738 | C4JWN8 | C4JEC2 | Uncharacterized protein; Belongs to the DEAD box helicase family. | UCH_1 domain-containing protein. | 0.429 |
| UREG_06980 | UREG_01089 | C4JWN8 | C4JG09 | Uncharacterized protein; Belongs to the DEAD box helicase family. | AD domain-containing protein. | 0.869 |
| UREG_06980 | UREG_03913 | C4JWN8 | C4JM55 | Uncharacterized protein; Belongs to the DEAD box helicase family. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.665 |
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