STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_01054RED_N domain-containing protein. (537 aa)    
Predicted Functional Partners:
UREG_00934
Uncharacterized protein.
   
 0.931
UREG_05006
MFAP1 domain-containing protein.
   
  0.920
UREG_03749
Uncharacterized protein.
   
 0.871
UREG_01472
116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein).
    
 
 0.803
UREG_02020
IU_nuc_hydro domain-containing protein.
 
      0.800
UREG_07187
C2H2-type domain-containing protein.
    
  0.788
UREG_03384
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
  0.745
UREG_07694
PWI domain-containing protein.
   
 
  0.647
UREG_01381
C2H2-type domain-containing protein.
   
 
  0.638
UREG_03498
Pre-mRNA splicing factor rse1.
    
   0.632
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
Server load: low (22%) [HD]