STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_03786UBA domain-containing protein. (1185 aa)    
Predicted Functional Partners:
UREG_04750
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.997
UREG_01570
Uncharacterized protein.
  
 0.988
UREG_05862
Uncharacterized protein.
  
 0.988
UREG_05863
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
  
 0.988
UREG_05959
SNC2 protein.
   
 
 0.947
UREG_03621
Heat shock protein Hsp88.
  
 0.932
UREG_03293
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.911
UREG_06214
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.902
UREG_01160
Heat shock protein 70; Belongs to the heat shock protein 70 family.
  
 0.900
UREG_07658
Uncharacterized protein.
  
 0.900
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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