STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_04258WD_REPEATS_REGION domain-containing protein. (516 aa)    
Predicted Functional Partners:
UREG_00978
60S ribosomal protein L10-B.
    
 
 0.990
UREG_04260
Uncharacterized protein.
 
      0.854
UREG_04922
WD_REPEATS_REGION domain-containing protein.
   
  
 0.844
UREG_03986
Uncharacterized protein.
 
      0.802
UREG_03046
Fes1 domain-containing protein.
    
 
 0.632
UREG_05091
Uncharacterized protein.
    
 
 0.632
UREG_06393
Ribosomal protein L16.
    
 
 0.632
UREG_02930
Uncharacterized protein.
    
 0.614
UREG_03832
ANK_REP_REGION domain-containing protein.
   
  
 0.595
UREG_04862
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.590
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.