STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_05434Transporter ATM1. (706 aa)    
Predicted Functional Partners:
UREG_05721
Uncharacterized protein.
    
 0.714
UREG_03287
Uncharacterized protein.
    
0.693
UREG_06936
Glyco_transf_20 domain-containing protein.
 
 
    0.670
UREG_07912
Pkinase_fungal domain-containing protein.
    
 0.632
UREG_05444
Mitochondrial RNA splicing protein MRS3; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.622
UREG_00230
Cysteine desulfurase.
    
 
 0.616
UREG_01599
Fe-S_biosyn domain-containing protein.
      
 0.612
TAH18
NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of DRE2. Positively controls H(2)O(2)-induced cell death; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
      
 0.612
UREG_03424
ATP-binding cassette sub-family E member 1.
      
 0.612
UREG_05124
Fe-S_biosyn domain-containing protein.
      
 0.612
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.