STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UREG_05565Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (450 aa)    
Predicted Functional Partners:
UREG_05566
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
 
    
 0.893
UREG_02209
60S ribosomal protein L7.
  
 
 0.858
UREG_03409
60S ribosomal protein L35.
  
 
 0.845
UREG_04440
60S ribosomal protein L5.
  
 
 0.842
UREG_04031
60S ribosomal protein L23a.
  
 
 0.825
UREG_04710
60S ribosomal protein L26-1.
  
   0.822
UREG_02033
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.807
UREG_02044
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.794
UREG_03021
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.778
UREG_06966
60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family.
  
   0.765
Your Current Organism:
Uncinocarpus reesii
NCBI taxonomy Id: 336963
Other names: U. reesii 1704, Uncinocarpus reesii 1704
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