STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCANP00000000048Uncharacterized protein. (5112 aa)    
Predicted Functional Partners:
PRPF19
Pre-mRNA processing factor 19.
    
 0.592
XAB2
XPA binding protein 2.
    
 0.587
SNW1
SNW domain containing 1.
    
 0.578
NUP155
Nucleoporin 155.
   
 0.528
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.522
NUP214
Nucleoporin 214.
    
 0.511
NUP88
Nucleoporin 88.
    
 0.509
BUD31
BUD31 homolog.
    
 0.504
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.497
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.494
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.