SPAG9 protein (Colobus angolensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SPAG9

Sperm associated antigen 9. (1339 aa)

Predicted Functional Partners:

NFKB1

0.839

ARF6

0.800

SMCO1

0.785

MAP2K7

0.766

PLK1

0.746

DYNC1LI2

0.740

MAPK8IP1

0.727

KLC1

0.713

CDO1

0.713

MAPK8IP2

0.708

Your Current Organism:

Colobus angolensis

NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARF6	SPAG9	ENSCANP00000000507	ENSCANP00000001034	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Sperm associated antigen 9.	0.800
CDO1	SPAG9	ENSCANP00000026341	ENSCANP00000001034	Cysteine dioxygenase.	Sperm associated antigen 9.	0.713
DYNC1LI2	KLC1	ENSCANP00000024552	ENSCANP00000026042	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Kinesin light chain 1.	0.495
DYNC1LI2	PLK1	ENSCANP00000024552	ENSCANP00000008111	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Serine/threonine-protein kinase PLK.	0.672
DYNC1LI2	SPAG9	ENSCANP00000024552	ENSCANP00000001034	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Sperm associated antigen 9.	0.740
KLC1	DYNC1LI2	ENSCANP00000026042	ENSCANP00000024552	Kinesin light chain 1.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.495
KLC1	MAPK8IP1	ENSCANP00000026042	ENSCANP00000029154	Kinesin light chain 1.	Mitogen-activated protein kinase 8 interacting protein 1.	0.833
KLC1	MAPK8IP2	ENSCANP00000026042	ENSCANP00000024428	Kinesin light chain 1.	PID domain-containing protein.	0.707
KLC1	SPAG9	ENSCANP00000026042	ENSCANP00000001034	Kinesin light chain 1.	Sperm associated antigen 9.	0.713
MAP2K7	MAPK8IP1	ENSCANP00000002031	ENSCANP00000029154	Mitogen-activated protein kinase kinase 7.	Mitogen-activated protein kinase 8 interacting protein 1.	0.987
MAP2K7	MAPK8IP2	ENSCANP00000002031	ENSCANP00000024428	Mitogen-activated protein kinase kinase 7.	PID domain-containing protein.	0.984
MAP2K7	SPAG9	ENSCANP00000002031	ENSCANP00000001034	Mitogen-activated protein kinase kinase 7.	Sperm associated antigen 9.	0.766
MAPK8IP1	KLC1	ENSCANP00000029154	ENSCANP00000026042	Mitogen-activated protein kinase 8 interacting protein 1.	Kinesin light chain 1.	0.833
MAPK8IP1	MAP2K7	ENSCANP00000029154	ENSCANP00000002031	Mitogen-activated protein kinase 8 interacting protein 1.	Mitogen-activated protein kinase kinase 7.	0.987
MAPK8IP1	MAPK8IP2	ENSCANP00000029154	ENSCANP00000024428	Mitogen-activated protein kinase 8 interacting protein 1.	PID domain-containing protein.	0.984
MAPK8IP1	SPAG9	ENSCANP00000029154	ENSCANP00000001034	Mitogen-activated protein kinase 8 interacting protein 1.	Sperm associated antigen 9.	0.727
MAPK8IP2	KLC1	ENSCANP00000024428	ENSCANP00000026042	PID domain-containing protein.	Kinesin light chain 1.	0.707
MAPK8IP2	MAP2K7	ENSCANP00000024428	ENSCANP00000002031	PID domain-containing protein.	Mitogen-activated protein kinase kinase 7.	0.984
MAPK8IP2	MAPK8IP1	ENSCANP00000024428	ENSCANP00000029154	PID domain-containing protein.	Mitogen-activated protein kinase 8 interacting protein 1.	0.984
MAPK8IP2	SPAG9	ENSCANP00000024428	ENSCANP00000001034	PID domain-containing protein.	Sperm associated antigen 9.	0.708