STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASCC3Activating signal cointegrator 1 complex subunit 3. (2202 aa)    
Predicted Functional Partners:
ASCC2
Activating signal cointegrator 1 complex subunit 2.
    
 0.988
TRIP4
Thyroid hormone receptor interactor 4.
    
 0.972
PRPF8
Pre-mRNA processing factor 8.
   
 0.970
ASCC1
Activating signal cointegrator 1 complex subunit 1.
    
 0.964
PRPF6
Pre-mRNA processing factor 6.
   
 0.944
SEC63
SEC63 homolog, protein translocation regulator.
     
0.922
SNRPF
Sm domain-containing protein.
   
 0.911
SNRPD3
Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.
   
 0.905
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
   
 0.881
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 0.871
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.