STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM5ALysine demethylase 5A. (1690 aa)    
Predicted Functional Partners:
ATP5F1D
ATP synthase F1 subunit delta.
  
 0.975
LOC105525984
Uncharacterized protein.
  
 0.950
ENSCANP00000009961
Uncharacterized protein.
  
 0.950
ATP5PO
Uncharacterized protein.
  
 0.950
LOC105507259
Uncharacterized protein.
  
 0.950
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.950
ATP5F1C
ATP synthase F1 subunit gamma.
  
 0.950
ATP5F1E
ATP synthase F1 subunit epsilon.
    
 0.862
ATP5ME
ATP synthase membrane subunit e.
   
 0.838
INCENP
Inner centromere protein.
   
 0.838
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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